INGRID

INGRID: Integrative Genomics Robust iDentification of cancer subgroups ===

INGRID is a statistical approach that integrates information from biological pathway databases with high-throughput genomic data to improve the robustness for identification and interpretation of molecularly-defined subgroups of cancer patients.

Installation

To install the development version of INGRID, it’s easiest to use the ‘devtools’ package.

#install.packages("devtools")
library(devtools)
install_github("dongjunchung/INGRID")

Usage

The R package vignette will provide a good start point for the genetic analysis using INGRID package, including the overview of INGRID package and the example command lines:

library(INGRID)
vignette("INGRID-example")